Biblio

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Schauner R, Cress J, Hong C, Wald D, Ramakrishnan P. Single cell and bulk RNA expression analyses identify enhanced hexosamine biosynthetic pathway and O-GlcNAcylation in acute myeloid leukemia blasts and stem cells. Front Immunol. 2024;15:1327405.

Ton M-LN, Guibentif C, Göttgens B. Single cell genomics and developmental biology: moving beyond the generation of cell type catalogues. Curr Opin Genet Dev. 2020;64:66-71.

Vega SL, Kwon M, Mauck RL, Burdick JA. Single Cell Imaging to Probe Mesenchymal Stem Cell N-Cadherin Mediated Signaling within Hydrogels. Ann Biomed Eng. 2016.

Trott J, Arias AMartinez. Single cell lineage analysis of mouse embryonic stem cells at the exit from pluripotency. Biol Open. 2013;2(10):1049-56.

Cao J, Zhao X, Qin Z, Lv S, Du L, Liu Z, Fan L, Bo H. Single Cell Map of Human Azoospermia Testis Caused by Cyclophosphamide Chemotherapy. Sci Data. 2024;11(1):163.

Shen M, Shang M, Tian R, Hu Y, Han Q, Hu J, An G, Wang B, Cao Z, Lin X, et al. Single Cell Molecular Alterations Reveal Target Cells and Pathways of Conditioned Fear Memory. Brain Res. 2023:148309.

Ng EXien, Miller MA, Jing T, Chen C-H. Single cell multiplexed assay for proteolytic activity using droplet microfluidics. Biosens Bioelectron. 2016;81:408-414.

Chen W, Li S, Kulkarni AShreeram, Huang L, Cao J, Qian K, Wan J. Single Cell Omics: From Assay Design to Biomedical Application. Biotechnol J. 2019:e1900262.

Liu M, Wei X, Wu C, Liu JH, Wei Y, Wang X, Chen M-L, Yang T, Wang J-H. Single Cell Phenotypic Analysis for Cancer Stem Cell Identification by Dual-Isotope ICP-QMS. Anal Chem. 2023.

Liu X, Aneas I, Sakabe N, Anderson RL, Billstrand C, Paz C, Kaur H, Furner B, Choi S, Prichina AY, et al. Single cell profiling at the maternal-fetal interface reveals a deficiency of PD-L1 non-immune cells in human spontaneous preterm labor. Sci Rep. 2023;13(1):7903.

M Neely D, Xie S, Prince LM, Kim H, Tukker AM, Aschner M, Thimmapuram J, Bowman AB. Single cell RNA sequencing detects persistent cell type- and methylmercury exposure paradigm-specific effects in a human cortical neurodevelopmental model. Food Chem Toxicol. 2021:112288.

Riemondy KA, Jansing NL, Jiang P, Redente EF, Gillen AE, Fu R, Miller AJ, Spence JR, Gerber AN, Hesselberth JR, et al. Single cell RNA sequencing identifies TGFβ as a key regenerative cue following LPS-induced lung injury. JCI Insight. 2019;5.

Liu J, Li Y, Zhang Y, Cheng Q, Liu H, He L, Chen L, Zhao T, Liang P, Luo W. Single cell RNA-seq analysis identifies angiotensinogen and galanin as unique molecular markers of acinar cells in murine salivary glands. Stem Cells Dev. 2023.

Lv Z, Han J, Li J, Guo H, Fei Y, Sun Z, Dong J, Wang M, Fan C, Li W, et al. Single cell RNA-seq analysis identifies ferroptotic chondrocyte cluster and reveals TRPV1 as an anti-ferroptotic target in osteoarthritis. EBioMedicine. 2022;84:104258.

Yuan H, Zhang P, Xin Y, Liu Z, Gao B. Single cell RNA-seq identifies a FOS/JUN-related monocyte signature associated with clinical response of heart failure patients with mesenchymal stem cell therapy. Aging (Albany NY). 2024;16.

Francesconi M, Di Stefano B, Berenguer C, de Andrés-Aguayo L, Plana-Carmona M, Mendez-Lago M, Guillaumet-Adkins A, Rodriguez-Esteban G, Gut M, Gut IG, et al. Single cell RNA-seq identifies the origins of heterogeneity in efficient cell transdifferentiation and reprogramming. Elife. 2019;8.

Anand P, Guillaumet-Adkins A, Dimitrova V, Yun H, Drier Y, Sotudeh N, Rogers AJollyette, Ouseph MM, Nair M, Potdar S, et al. Single cell RNA-seq reveals developmental plasticity with coexisting oncogenic and immune evasion programs in ETP-ALL. Blood. 2020.

Kolodziejczyk AA, Kim JKyoung, Tsang JCH, Ilicic T, Henriksson J, Natarajan KN, Tuck AC, Gao X, Bühler M, Liu P, et al. Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation. Cell Stem Cell. 2015;17(4):471-485.

Zhang Y, Zhong Y, Yu Z, Cheng X, Zou L, Liu X. Single cell RNA-sequencing reveals the cellular senescence of placental mesenchymal stem/stromal cell in preeclampsia. Placenta. 2024;150:39-51.

Dasgupta S, Goodale B, Tanguay R. Single cell sequencing of zebrafish kidney marrows reveals AHR2-dependent endogenous regulation of hematopoiesis. bioRxiv. 2024.

Zhang W, Yang B, Weng L, Li J, Bai J, Wang T, Wang J, Ye J, Jing H, Jiao Y, et al. Single cell sequencing reveals cell populations that predict primary resistance to imatinib in chronic myeloid leukemia. Aging (Albany NY). 2020;12.

Yu Y, Zheng H, Buckwalter JA, Martin JA. Single cell sorting identifies progenitor cell population from full thickness bovine articular cartilage. Osteoarthritis Cartilage. 2014.

Zhou Y, Basu S, Laue E, Seshia AA. Single cell studies of mouse embryonic stem cell (mESC) differentiation by electrical impedance measurements in a microfluidic device. Biosens Bioelectron. 2016;81:249-258.

Sievert C, Beuerle T, Hollmann J, Ober D. Single cell subtractive transcriptomics for identification of cell-specifically expressed candidate genes of pyrrolizidine alkaloid biosynthesis. Phytochemistry. 2015;117:17-24.

Spangler A, Su EY, Craft AM, Cahan P. A single cell transcriptional portrait of embryoid body differentiation and comparison to progenitors of the developing embryo. Stem Cell Res. 2018;31:201-215.

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