Biblio

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Journal Article

Babarinde IA, Ma G, Li Y, Deng B, Luo Z, Liu H, Abdul MMd, Ward C, Chen M, Fu X, et al. Transposable element sequence fragments incorporated into coding and noncoding transcripts modulate the transcriptome of human pluripotent stem cells. Nucleic Acids Res. 2021.

Chen A, Liao S, Cheng M, Ma K, Wu L, Lai Y, Qiu X, Yang J, Xu J, Hao S, et al. Spatiotemporal transcriptomic atlas of mouse organogenesis using DNA nanoball-patterned arrays. Cell. 2022.

Liu C, Li R, Li Y, Lin X, Zhao K, Liu Q, Wang S, Yang X, Shi X, Ma Y, et al. Spatiotemporal mapping of gene expression landscapes and developmental trajectories during zebrafish embryogenesis. Dev Cell. 2022.

Xu J, Guo P, Hao S, Shangguan S, Shi Q, Volpe G, Huang K, Zuo J, An J, Yuan Y, et al. A spatiotemporal atlas of mouse liver homeostasis and regeneration. Nat Genet. 2024.

Wei X, Fu S, Li H, Liu Y, Wang S, Feng W, Yang Y, Liu X, Zeng Y-Y, Cheng M, et al. Single-cell Stereo-seq reveals induced progenitor cells involved in axolotl brain regeneration. Science. 2022;377(6610):eabp9444.

Moiseeva V, Cisneros A, Sica V, Deryagin O, Lai Y, Jung S, Andrés E, An J, Segalés J, Ortet L, et al. Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature. 2022.

Kanwal S, Guo X, Ward C, Volpe G, Qin B, Esteban MA, Bao X. Role of Long Non-coding RNAs in Reprogramming to Induced Pluripotency. Genomics Proteomics Bioinformatics. 2020.

Viegas JO, Azad GKumar, Lv Y, Fishman L, Paltiel T, Pattabiraman S, Park JEun, Kaganovich D, Sze SKwan, Rabani M, et al. RNA degradation eliminates developmental transcripts during murine embryonic stem cell differentiation via CAPRIN1-XRN2. Dev Cell. 2022.

Huang J, Guo X, Fan N, Song J, Zhao B, Ouyang Z, Liu Z, Zhao Y, Yan Q, Yi X, et al. RAG1/2 Knockout Pigs with Severe Combined Immunodeficiency. J Immunol. 2014.

Zhuang Q, Li W, Benda C, Huang Z, Ahmed T, Liu P, Guo X, Ibañez DP, Luo Z, Zhang M, et al. Publisher Correction: NCoR/SMRT co-repressors cooperate with c-MYC to create an epigenetic barrier to somatic cell reprogramming. Nat Cell Biol. 2018.

Wang W, Zhou L, Li H, Sun T, Wen X, Li W, Esteban MA, Hoffman AR, Hu J-F, Cui J. Profiling the role of m6A effectors in the regulation of pluripotent reprogramming. Hum Genomics. 2024;18(1):33.

Wang LLu, Xu XTing, Jiang C, Ma G, Huang YHua, Zhang H, Lai YWei, Wang M, Ahmed T, Lin RXia, et al. mTORC1-PGC1 axis regulates mitochondrial remodeling during reprogramming. FEBS J. 2019.

Ho W-I, Hu Y, Cheng C-W, Wei R, Yang J, Li N, Au K-W, Tse Y-L, Wang Q, Ng K-M, et al. Liposome-encapsulated curcumin attenuates HMGB1-mediated hepatic inflammation and fibrosis in a murine model of Wilson's disease. Biomed Pharmacother. 2022;152:113197.

Lv Y, Tariq M, Guo X, Kanwal S, Esteban MA. Intricacies in the crosstalk between metabolic enzymes, RNA and protein translation. J Mol Cell Biol. 2019.

Wang Y, Fan N, Song J, Zhong J, Guo X, Tian W, Zhang Q, Cui F, Li L, Newsome PN, et al. Generation of knockout rabbits using transcription activator-like effector nucleases. Cell Regen (Lond). 2014;3(1):3.

Abdul MMd, Ibañez DP, Zhao P, Liu H, Zhong X, Li Y, Zhang M, Li W, Li Y, Ward C, et al. Generation of an induced pluripotent stem cell line (GIBHi003-A) from a Parkinson's disease patient with mutant PINK1 (p. I368N). Stem Cell Res. 2019;41:101607.

Zhang M, Ibañez DP, Fan W, Liu H, Zhong X, Wang X, Li Y, Abdul MMd, Li W, Li Y, et al. Generation of a PARK2 homozygous knockout induced pluripotent stem cell line (GIBHi002-A-1) with two common isoforms abolished. Stem Cell Res. 2019;41:101602.

Harreither E, Rydberg HA, Amand HL, Jadhav V, Fliedl L, Benda C, Esteban MA, Pei D, Borth N, Grillari-Voglauer R, et al. Characterization of a novel cell penetrating peptide derived from human Oct4. Cell Regen (Lond). 2014;3(1):2.

Moiseeva V, Cisneros A, Sica V, Deryagin O, Lai Y, Jung S, Andrés E, An J, Segalés J, Ortet L, et al. Author Correction: Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature. 2023.