Biblio

Author Title Type [ Year(Asc)]
Filters: Author is Rinn, John L  [Clear All Filters]
2023
Long Y, Hwang T, Gooding AR, Goodrich KJ, Vallery TK, Rinn JL, Cech TR. Evaluation of the RNA-dependence of PRC2 binding to chromatin in human pluripotent stem cells. bioRxiv. 2023.
Delfosse K, Gerhardinger C, Rinn JL, Maass PG. High-throughput functional analysis of regulatory variants using a massively parallel reporter assay. STAR Protoc. 2023;4(4):102731.
Landshammer A, Bolondi A, Kretzmer H, Much C, Buschow R, Rose A, Wu H-J, Mackowiak SD, Braendl B, Giesselmann P, et al. is a transiently expressed non-coding RNA essential for human endoderm formation. Elife. 2023;12.
2021
Teo AKee Keong, Nguyen L, Gupta MK, Lau HHui, Loo LSai Weng, Jackson N, Lim CSiang, Mallard W, Gritsenko MA, Rinn JL, et al. Defective insulin receptor signaling in hPSCs skews pluripotency and negatively perturbs neural differentiation. J Biol Chem. 2021:100495.
Andergassen D, Smith ZD, Kretzmer H, Rinn JL, Meissner A. Diverse epigenetic mechanisms maintain parental imprints within the embryonic and extraembryonic lineages. Dev Cell. 2021;56(21):2995-3005.e4.
Haswell JR, Mattioli K, Gerhardinger C, Maass PG, Foster DJ, Peinado P, Wang X, Medina PP, Rinn JL, Slack FJ. Genome-wide CRISPR interference screen identifies long non-coding RNA loci required for differentiation and pluripotency. PLoS One. 2021;16(11):e0252848.
2020
Friesen M, Warren CR, Yu H, Toyohara T, Ding Q, Florido MHC, Sayre C, Pope BD, Goff LA, Rinn JL, et al. Mitoregulin Controls β-Oxidation in Human and Mouse Adipocytes. Stem Cell Reports. 2020.
2018
Elling R, Robinson EK, Shapleigh B, Liapis SC, Covarrubias S, Katzman S, Groff AF, Jiang Z, Agarwal S, Motwani M, et al. Genetic Models Reveal cis and trans Immune-Regulatory Activities for lincRNA-Cox2. Cell Rep. 2018;25(6):1511-1524.e6.
2016
Melé M, Rinn JL. "Cat's Cradling" the 3D Genome by the Act of LncRNA Transcription. Mol Cell. 2016;62(5):657-664.
Ferreira LMR, Meissner TB, Mikkelsen TS, Mallard W, O'Donnell CW, Tilburgs T, Gomes HAB, Camahort R, Sherwood RI, Gifford DK, et al. A distant trophoblast-specific enhancer controls HLA-G expression at the maternal-fetal interface. Proc Natl Acad Sci U S A. 2016.
2015
Choi J, Lee S, Mallard W, Clement K, Tagliazucchi GMalagoli, Lim H, Choi IYoung, Ferrari F, Tsankov AM, Pop R, et al. A comparison of genetically matched cell lines reveals the equivalence of human iPSCs and ESCs. Nat Biotechnol. 2015.
Cacchiarelli D, Trapnell C, Ziller MJ, Soumillon M, Cesana M, Karnik R, Donaghey J, Smith ZD, Ratanasirintrawoot S, Zhang X, et al. Integrative Analyses of Human Reprogramming Reveal Dynamic Nature of Induced Pluripotency. Cell. 2015;162(2):412-424.
Shechner DM, Hacisuleyman E, Younger ST, Rinn JL. Multiplexable, locus-specific targeting of long RNAs with CRISPR-Display. Nat Methods. 2015.
Broadbent KM, Broadbent JC, Ribacke U, Wirth D, Rinn JL, Sabeti PC. Strand-specific RNA sequencing in Plasmodium falciparum malaria identifies developmentally regulated long non-coding RNA and circular RNA. BMC Genomics. 2015;16(1):454.
2014
Lodato S, Molyneaux BJ, Zuccaro E, Goff LA, Chen H-H, Yuan W, Meleski A, Takahashi E, Mahony S, Rinn JL, et al. Gene co-regulation by Fezf2 selects neurotransmitter identity and connectivity of corticospinal neurons. Nat Neurosci. 2014.
Rinn JL. lncRNAs: Linking RNA to Chromatin. Cold Spring Harb Perspect Biol. 2014;6(8).
2013
Sauvageau M, Goff LA, Lodato S, Bonev B, Groff AF, Gerhardinger C, Sanchez-Gomez DB, Hacisuleyman E, Li E, Spence M, et al. Multiple knockout mouse models reveal lincRNAs are required for life and brain development. Elife. 2013;2:e01749.