Author [ Title(Desc)] Type Year
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Olsson A, Venkatasubramanian M, Chaudhri VK, Aronow BJ, Salomonis N, Singh H, H Grimes L. Single-cell analysis of mixed-lineage states leading to a binary cell fate choice. Nature. 2016.
Mizrak D, Levitin HMendes, Delgado AC, Crotet V, Yuan J, Chaker Z, Silva-Vargas V, Sims PA, Doetsch F. Single-Cell Analysis of Regional Differences in Adult V-SVZ Neural Stem Cell Lineages. Cell Rep. 2019;26(2):394-406.e5.
De Micheli AJ, Laurilliard EJ, Heinke CL, Ravichandran H, Fraczek P, Soueid-Baumgarten S, De Vlaminck I, Elemento O, Cosgrove BD. Single-Cell Analysis of the Muscle Stem Cell Hierarchy Identifies Heterotypic Communication Signals Involved in Skeletal Muscle Regeneration. Cell Rep. 2020;30(10):3583-3595.e5.
Seiler KM, Waye SE, Kong W, Kamimoto K, Bajinting A, Goo WH, Onufer EJ, Courtney C, Guo J, Warner BW, et al. Single-Cell Analysis Reveals Regional Reprogramming during Adaptation to Massive Small Bowel Resection in Mice. Cell Mol Gastroenterol Hepatol. 2019.
Jevitt A, Chatterjee D, Xie G, Wang X-F, Otwell T, Huang Y-C, Deng W-M. A single-cell atlas of adult Drosophila ovary identifies transcriptional programs and somatic cell lineage regulating oogenesis. PLoS Biol. 2020;18(4):e3000538.
Bolander J, Herpelinck T, Chaklader M, Gklava C, Geris L, Luyten FP. Single-cell characterization and metabolic profiling of in vitro cultured human skeletal progenitors with enhanced in vivo bone forming capacity. Stem Cells Transl Med. 2019.
Chung C-Y, Ma Z, Dravis C, Preissl S, Poirion O, Luna G, Hou X, Giraddi RR, Ren B, Wahl GM. Single-Cell Chromatin Analysis of Mammary Gland Development Reveals Cell-State Transcriptional Regulators and Lineage Relationships. Cell Rep. 2019;29(2):495-510.e6.
Matsumura T, Tatsumi K, Noda Y, Nakanishi N, Okonogi A, Hirano K, Li L, Osumi T, Tada T, Kotera H. Single-cell cloning and expansion of human induced pluripotent stem cells by a microfluidic culture device. Biochem Biophys Res Commun. 2014.
Farbehi N, Patrick R, Dorison A, Xaymardan M, Janbandhu V, Wystub-Lis K, Ho JWK, Nordon RE, Harvey RP. Single-cell expression profiling reveals dynamic flux of cardiac stromal, vascular and immune cells in health and injury. Elife. 2019;8.
van Eijl RAPM, van Buggenum JAGL, Tanis SEJ, Hendriks J, Mulder KW. Single-Cell ID-seq Reveals Dynamic BMP Pathway Activation Upstream of the MAF/MAFB-Program in Epidermal Differentiation. iScience. 2018;9:412-422.
Fan W, Chen X, Ge Y, Jin Y, Jin Q, Zhao J. Single-cell impedance analysis of osteogenic differentiation by droplet-based microfluidics. Biosens Bioelectron. 2019;145:111730.
Barbosa JS, Di Giaimo R, Götz M, Ninkovic J. Single-cell in vivo imaging of adult neural stem cells in the zebrafish telencephalon. Nat Protoc. 2016;11(8):1360-1370.
Hiratsuka T, Komatsu N. Single-Cell Live Imaging. Methods Mol Biol. 2019;1979:409-421.
Wang YJ, Golson ML, Schug J, Traum D, Liu C, Vivek K, Dorrell C, Naji A, Powers AC, Chang K-M, et al. Single-Cell Mass Cytometry Analysis of the Human Endocrine Pancreas. Cell Metab. 2016;24(4):616-626.
Bjornson ZB, Nolan GP, Fantl WJ. Single-cell mass cytometry for analysis of immune system functional states. Curr Opin Immunol. 2013.
Mingueneau M, Krishnaswamy S, Spitzer MH, Bendall SC, Stone EL, Hedrick SM, Pe'er D, Mathis D, Nolan GP, Benoist C. Single-cell mass cytometry of TCR signaling: Amplification of small initial differences results in low ERK activation in NOD mice. Proc Natl Acad Sci U S A. 2014.
Han L, Qiu P, Zeng Z, Jorgensen JL, Mak DH, Burks JK, Schober W, McQueen TJ, Cortes J, Tanner SD, et al. Single-cell mass cytometry reveals intracellular survival/proliferative signaling in FLT3-ITD-mutated AML stem/progenitor cells. Cytometry A. 2015.
Meijer M, Rehbach K, Brunner JW, Classen JA, Lammertse HCA, van Linge LA, Schut D, Krutenko T, Hebisch M, L Cornelisse N, et al. A Single-Cell Model for Synaptic Transmission and Plasticity in Human iPSC-Derived Neurons. Cell Rep. 2019;27(7):2199-2211.e6.
van den Hurk M, Bardy C. Single-cell multimodal transcriptomics to study neuronal diversity in human stem cell-derived brain tissue and organoid models. J Neurosci Methods. 2019:108350.
Ye M, Yang Z-Y, Zhang Y, Xing Y-X, Xie Q-G, Zhou J-H, Wang L, Xie W, Kee K, Chian R-C. Single-cell multiomic analysis of in vivo and in vitro matured human oocytes. Hum Reprod. 2020.
Zhou W, Lin J, Zhao K, Jin K, He Q, Hu Y, Feng G, Cai Y, Xia C, Liu H, et al. Single-Cell Profiles and Clinically Useful Properties of Human Mesenchymal Stem Cells of Adipose and Bone Marrow Origin. Am J Sports Med. 2019:363546519848678.
Mizrak D, N Bayin S, Yuan J, Liu Z, Suciu RM, Niphakis MJ, Ngo N, Lum KM, Cravatt BF, Joyner AL, et al. Single-Cell Profiling and SCOPE-Seq Reveal Lineage Dynamics of Adult Ventricular-Subventricular Zone Neurogenesis and NOTUM as a Key Regulator. Cell Rep. 2020;31(12):107805.
Khoo BLuan, Chaudhuri PKant, Ramalingam N, Tan DShao Weng, Lim CTeck, Warkiani MEbrahimi. Single-cell profiling approaches to probing tumor heterogeneity. Int J Cancer. 2016.
Daniszewski M, Nguyen Q, Chy HS, Singh V, Crombie DE, Kulkarni T, Liang HH, Sivakumaran P, Lidgerwood GE, Hernández D, et al. Single-Cell Profiling Identifies Key Pathways Expressed by iPSCs Cultured in Different Commercial Media. iScience. 2018;7:30-39.
Li Q, Huang Q. Single-cell qPCR demonstrates that Repsox treatment changes cell fate from endoderm to neuroectoderm and disrupts epithelial-mesenchymal transition. PLoS One. 2019;14(10):e0223724.